College of Sciences staff

Contact details +64 (06) 356 9099

David Winter

Postdoctoral Fellow in Computational Fungal Genomics

Institute of Fundamental Sciences

Research Outputs

Journal

Wu, SH., Schwartz, RS., Winter, DJ., Conrad, DF., & Cartwright, RA. (2017). Estimating error models for whole genome sequencing using mixtures of dirichlet-multinomial distributions. Bioinformatics. 33(6), 1-8 Retrieved from https://academic.oup.com/bioinformatics
[Journal article]Authored by: Winter, D.
Wallis, GP., Cameron-Christie, SR., Kennedy, HL., Palmer, G., Sanders, TR., & Winter, DJ. (2017). Interspecific hybridization causes long-term phylogenetic discordance between nuclear and mitochondrial genomes in freshwater fishes. Molecular Ecology. 26(12), 3116-3127
[Journal article]Authored by: Winter, D.
Michonneau, F., Brown, JW., & Winter, DJ. (2016). rotl: an R package to interact with the Open Tree of Life data. Methods in Ecology and Evolution. 7, 1476-1481
[Journal article]Authored by: Winter, D.
Smith, AM., Key, MM., Henderson, ZE., Davis, VC., & Winter, DJ. (2016). Pretreatment for removal of organic material is not necessary for x-ray-diffraction determination of mineralogy in temperate skeletal carbonate. Journal of Sedimentary Research. 86(12), 1425-1433 Retrieved from http://jsedres.geoscienceworld.org/content/86/12/1425
[Journal article]Authored by: Winter, D.
Long, H., Winter, DJ., Chang, AY-C., Sung, W., Wu, SH., Balboa, M., . . . Zufall, RA. (2016). Low base-substitution mutation rate in the germline genome of the ciliate Tetrahymena thermophila. Genome Biology and Evolution. 8(12), 3629-3639
[Journal article]Authored by: Winter, D.
Smith, AM., Clark, DE., Lamare, MD., Winter, DJ., & Byrne, M. (2016). Risk and resilience: Variations in magnesium in echinoid skeletal calcite. Marine Ecology Progress Series. 561, 1-16
[Journal article]Authored by: Winter, D.
Winter, DJ., Pacheco, MA., Vallejo, AF., Schwartz, RS., Arevalo-Herrera, M., Herrera, S., . . . Escalante, AA. (2015). Whole genome sequencing of field isolates reveals extensive genetic diversity in plasmodium vivax from Colombia. PLoS Negl Trop Dis. 9, e0004252-e0004252 Retrieved from https://www.plos.org/
[Journal article]Authored by: Winter, D.
Donald, KM., Winter, DJ., Ashcroft, AL., & Spencer, HG. (2015). Phylogeography of the whelk genus Cominella (Gastropoda: Buccinidae) suggests long-distance counter-current dispersal of a direct developer. Biological Journal of the Linnean Society. 115(2), 315-332 Retrieved from http://onlinelibrary.wiley.com/doi/10.1111/bij.12529/pdf
[Journal article]Authored by: Winter, D.
Smith, AM., Berman, J., Key, MM., & Winter, DJ. (2013). Not all sponges will thrive in a high-CO 2 ocean: Review of the mineralogy of calcifying sponges. Palaeogeography, Palaeoclimatology, Palaeoecology. 392(2013), 463-472
[Journal article]Authored by: Winter, D.
Smith, AM., Riedi, MA., & Winter, DJ. (2013). Temperate reefs in a changing ocean: skeletal carbonate mineralogy of serpulids. Marine biology. 160(9), 2281-2294 Retrieved from http://www.springer.com/gp/
[Journal article]Authored by: Winter, D.
Byrne, M., Lamare, M., Winter, D., Dworjanyn, SA., & Uthicke, S. (2013). The stunting effect of a high CO2 ocean on calcification and development in sea urchin larvae, a synthesis from the tropics to the poles. Philosophical Transactions of the Royal Society B: Biological Sciences. 368, 1-13 Retrieved from http://rstb.royalsocietypublishing.org./
[Journal article]Authored by: Winter, D.
Winter, DJ. (2012). MMOD: an R library for the calculation of population differentiation statistics. Molecular Ecology Resources. 12(6), 1158-1160 Retrieved from http://onlinelibrary.wiley.com/doi/10.1111/j.1755-0998.2012.03174.x/epdf
[Journal article]Authored by: Winter, D.
Smith, AM., Sutherland, JE., Kregting, L., Farr, TJ., & Winter, DJ. (2012). Phylomineralogy of the coralline red algae: Correlation of skeletal mineralogy with molecular phylogeny. Phytochemistry. 81, 97-108
[Journal article]Authored by: Winter, D.
Donald, KM., Preston, J., Williams, ST., Reid, DG., Winter, D., Alvarez, R., . . . Spencer, HG. (2012). Phylogenetic relationships elucidate colonization patterns in the intertidal grazers Osilinus Philippi, 1847 and Phorcus Risso, 1826 (Gastropoda: Trochidae) in the northeastern Atlantic Ocean and Mediterranean Sea. Molecular phylogenetics and evolution. 62(1), 35-45
[Journal article]Authored by: Winter, D.
Fraser, CI., Winter, DJ., Spencer, HG., & Waters, JM. (2010). Multigene phylogeny of the southern bull-kelp genus Durvillaea (Phaeophyceae: Fucales). Molecular Phylogenetics and Evolution. 57, 1301-1311
[Journal article]Authored by: Winter, D.
Steens, MI., Winter, DJ., Morris, R., McCartney, J., & Greenslade, P. (2007). New Zealand's giant Collembola: New information on distribution and morphology for Holacanthella Börner, 1906 (Neanuridae: Uchidanurinae). New Zealand Journal of Zoology. 34(1), 63-78
[Journal article]Authored by: Winter, D.

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