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Publications

Sultan, A., A. W. Robertson, M. W. Callmander, P. B. Phillipson, J-Y Meyer, and J. A. Tate. 2019. Widespread morphological parallelism in Korthalsella (Santalaceae, tribe Visceae): a molecular phylogenetic perspective. Taxon 68: 12041218. https://doi.org/10.1002/tax.12152

Prebble, J. M., H. M. Meudt, J. A. Tate, and V. V. Symonds. 2019. Comparing and co-analysing microsatellite and morphological data for species delimitation in the New Zealand native Myosotis pygmaea species group (Boraginaceae). Taxon 68: 731-750. https://doi.org/10.1002/tax.12096

One Thousand Plant Transcriptomes Initiative. One thousand plant transcriptomes and the phylogenomics of green plants. 2019. Nature 574 (7780): 679-685. https://www.nature.com/articles/s41586-019-1693-2

Conover, J. L., N. Karimi, N. Stenz, C. An, C. E. Grover, C. Skema, J. A. Tate, K. Wolff, S. A. Logan, J. F. Wendel, D. A. Baum. 2019. A Malvaceae mystery: a mallow maelstrom of genome multiplications and maybe misleading methods? Journal of Integrative Plant Biology 61:12-31. https://doi.org/10.1111/jipb.12746.

Badry, M. O., J. A. Tate, and M. G. Sheded. 2018. A new record of Abutilon grandifolium (subfamily Malvoideae, Malvaceae) from Qena Governorate, Egypt. Phytotaxa 382(3): 255-266. https://doi.org/10.11646/phytotaxa.382.3.2

Van Etten, M., C. A. Lehnebach, S. M. Pearson, A. W. Robertson, and J. A. Tate. 2018. Microsatellite markers for Corybas (Orchidaceae) species in New Zealand. Applications in Plant Sciences 6(11): e1192. http://dx.doi.org/10.1002/aps3.1192

Takeuchi, C., C. H. Kano, J. A. Tate and G. L. Esteves. 2018. Molecular phylogenetics and character evolution of Gaya and related genera (Malvoideae, Malvaceae). Systematic Botany 43: 676-688. https://doi.org/10.1600/036364418X697391

Sultan, A., J. A. Tate, P. J. de Lange, D. Glenny, J. J. Ladley, P. Heenan, and A. W. Robertson. 2018. Host range, host specificity, and regional host preferences of Korthalsella Tiegh. (Viscaceae) mistletoes in New Zealand. New Zealand Journal of Botany 56: 127-162. https://doi.org/10.1080/0028825X.2018.1464476.

Van Etten, M., P. Sukkaewnmanee, J. A. Tate, and A. W. Robertson. 2018. Pollinator service affects quantity but not quality of offspring in a widespread New Zealand endemic tree species. Conservation Genetics 19: 815-826. http://dx.doi.org/10.1007/s10592-018-1056-9

Prebble, J. M., H. M. Meudt, J. A. Tate, and V. V. Symonds. 2018. Bolstering species delimitation in difficult species complexes by analyzing herbarium and common garden morphological data: a case study using the New Zealand native Myosotis pygmaea species group (Boraginaceae). Systematic Botany 43:1-24. https://doi.org/10.1600/036364418X697058

Sharbrough, J., J. L. Conover, J. A. Tate, J. F. Wendel, and D. B. Sloan. 2017. Cytonuclear responses to genome doubling. American Journal of Botany 104: 1277-1280. http://www.amjbot.org/content/104/9/1277

Badry, M.O., D. M. Crayn, and J. A. Tate. 2017. Recognition of Hibiscus diversifolius subsp. rivularis (Bremek. & Oberm.) Exell (Malvaceae) in Australia. Austrobaileya 10: 113120. https://www.qld.gov.au/environment/assets/documents/plants-animals/herbarium/austrobaileya/badry-caryn-tate-austrobaileya-v10s1-p113-120.pdf

Sehrish, T., V. V. Symonds, D. E. Soltis, P. S. Soltis, and J. A. Tate. 2015. Cytonuclear coordination is not immediate upon allopolyploid formation in Tragopogon miscellus (Asteraceae) allopolyploids. PLoS ONE 10(12): e0144339. http://dx.doi.org/10.1371/journal.pone.0144339.

Badry, M. O., J. A. Tate, M. G. Sheded, S. M. El-Naggar, and S. T. Hamed. 2015. Macro- and micro-morphological characters of Hibiscus diversifolius Jacq. subsp. diversifolius (Malvaceae): A new record for the flora of Egypt. Feddes Repertorium 126: 3747. DOI: http://dx.doi.org/10.1002/fedr.201500016.

Van Etten, M. A., J. A. Tate, S. Anderson, D. Kelly, J. Ladley, M. Merrett, P. Peterson, and A. Robertson. 2015. The compounding effects of high pollen limitation, selfing rates and inbreeding depression leaves a New Zealand tree with few viable offspring. Annals of Botany 116: 833843. http://dx.doi.org/10.1093/aob/mcv118

Prebble, J. M., J. A. Tate, H. M. Meudt, and V. V. Symonds. 2015. Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species. Applications in Plant Sciences 3(6). http://dx.doi.org/10.3732/apps.1500027

Sehrish, T., V. V. Symonds, D. E. Soltis, P. S. Soltis, and J. A. Tate. 2014. Gene silencing via DNA methylation in naturally occurring Tragopogon miscellus (Asteraceae) allopolyploids. BMC Genomics 15: 701. http://dx.doi.org/10.1186/1471-2164-15-701.

Van Etten, M. A., G. J. Houliston, C. M. Mitchell, P. B. Heenan, A. W. Robertson, and J. A. Tate. 2014. Sophora microphylla (Fabaceae) microsatellite markers and their utility across the genus. Applications in Plant Sciences 2(3):1300081. http://dx.doi.org/10.3732/apps.1300081.

Van Etten, M. A., A. W. Robertson, and J. A. Tate. 2013. Microsatellite markers for the New Zealand endemic tree Fuchsia excorticata (Onagraceae). Applications in Plant Sciences 1 (10): 1300045. http://dx.doi.org/10.3732/apps.1300045.

McLay, T. G. B., J. A. Tate, and V. V. Symonds. 2012. Development of microsatellite markers for the endangered root holoparasite Dactylanthus taylorii (Balanophoraceae) using 454 pyrosequencing. American Journal of Botany e323e325. http://www.amjbot.org/content/99/8/e323.long

Buggs, R. J. A., S. Chamala, W. Wu, J. A. Tate, P. S. Schnable, D. E. Soltis, P. S. Soltis, W. B. Barbazuk. 2012. Rapid, repeated, and clustered loss of duplicated genes in Tragopogon allopolyploid populations of independent origin. Current Biology 22: 1-5. DOI: http://dx.doi.org/10.1016/j.cub.2011.12.027

Tate, J. A. 2011. The status of Urocarpidium (Malvaceae): insight from nuclear and plastid-based phylogenies. Taxon 60: 1330-1338. http://www.jstor.org/stable/41317537

Wagstaff, S. J. and J. A. Tate. 2011. Phylogeny and character evolution in the New Zealand endemic genus Plagianthus (Malveae, Malvaceae). Systematic Botany 36: 405-418. http://www.bioone.org/doi/pdf/10.1600/036364411X569589

Malinska, H., J. A. Tate, E. Mavrodiev, R. Matyek, K. Y. Lim, A. R. Leitch, D.E. Soltis, P.S. Soltis, and A. Kovařk. 2011. Ribosomal RNA genes evolution in Tragopogon: A story of New and Old World allopolyploids and the synthetic lines. Taxon 60: 348-354.

Buggs, R. J. A., L. Zhang, N. Miles, J. A. Tate, L. Gao, P. S. Schnable, W. B. Barbazuk, P. S. Soltis and D. E. Soltis. 2011. Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant. Current Biology 21: 551-556. http://dx.doi.org/10.1016/j.cub.2011.02.016

Malinska, H., J. A. Tate, R. Matyek, A. R. Leitch, D.E. Soltis, P.S. Soltis, and A. Kovařk. 2010. Similar patterns of rDNA evolution in synthetic and recently formed natural populations of Tragopogon allotetraploids. BMC Evolutionary Biology 10: 291. http://www.biomedcentral.com/1471-2148/10/291

Wagstaff, S. J., B. P. J. Molloy, and J. A. Tate. 2010. Evolutionary significance of long-distance dispersal and hybridization in the New Zealand endemic genus Hoheria (Malvaceae). Australian Systematic Botany 23: 112-130. http://www.publish.csiro.au/paper/SB09017.htm

Tate, J. A., P. Joshi, K. A. Soltis, P. S. Soltis, and D. E. Soltis. 2009. On the road to diploidization? Homoeolog loss in independently formed populations of the allopolyploid Tragopogon miscellus (Asteraceae). BMC Plant Biology 9: 80. http://dx.doi.org/10.1186/1471-2229-9-80

Tate, J. A., C. Acosta, J. McDill, A. del V. Ordez, E. A. Moscone, B. B. Simpson, and A. A. Cocucci. 2009. Phylogeny and character evolution in Nierembergia (Solanaceae): molecular, morphological, and cytogenetic evidence. Systematic Botany 34: 198-206. http://dx.doi.org/10.1600/036364409787602249

Tate, J. A., V. V. Symonds, A. N. Doust, R. J. A. Buggs, E. Mavrodiev, L. Majure, P. S. Soltis, and D. E. Soltis. 2009. Synthetic polyploids of Tragopogon miscellus and T. mirus (Asteraceae): 60 years after Ownbeys discovery. American Journal of Botany 96: 979-988. http://www.amjbot.org/content/96/5/979.long

Buggs, R. J. A., A. N. Doust, J. A. Tate, J. Koh, K. Soltis, F. A. Feltus, A. H. Paterson, P. S. Soltis, and D. E. Soltis. 2009. Gene loss and silencing in Tragopogon miscellus (Asteraceae): comparison of natural and synthetic allotetraploids. Heredity 103: 73-81. http://www.nature.com/hdy/journal/v103/n1/full/hdy200924a.html

Lim, Y. K., D. E. Soltis, P. S. Soltis, J. A. Tate, R. Matyek, H. rubařov, A. Kovařk, J. C. Pires, Z. Xiong, and A. R. Leitch. 2008. Rapid chromosome evolution in recently formed polyploids in Tragopogon (Asteraceae). PloS One 3 (10): 1-13. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0003353

R. Matyek, J. A. Tate, Y. K. Lim , H. rubařov, J. Koh, A. R. Leitch, D. E. Soltis, P. S. Soltis, and A. Kovařk. 2007. Concerted evolution of rDNA in recently formed Tragopogon allotetraploids is typically associated with an inverse correlation between gene copy number and expression. Genetics 176: 2509-2519. http://www.genetics.org/content/176/4/2509.long

Tate, J. A., Z. Ni, A.-C. Scheen, J. Koh, C. A. Gilbert, D. Lefkowitz, Z. J. Chen, P. S. Soltis, and D. E. Soltis. 2006. Evolution and expression of homeologous loci in Tragopogon miscellus (Asteraceae), a recent and reciprocally formed allopolyploid. Genetics 173: 1599-1611. http://www.genetics.org/content/173/3/1599.long

Tate, J. A., J. Fuertes Aguilar, S. J. Wagstaff, J. C. La Duke, T. A. Bodo Slotta, and B. B. Simpson. 2005. Phylogenetic relationships within the tribe Malveae (subfamily Malvoideae, Malvaceae) as inferred from ITS sequence data. American Journal of Botany 92: 584-602. http://www.amjbot.org/content/92/4/584.full

Simpson, B. B., J. A. Tate, and A. Weeks. 2005. The biogeography of Hoffmannseggia (Leguminosae, Caesalpinioideae, Caesalpinieae): A tale of many travels. Journal of Biogeography 32: 15-27. http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2699.2004.01161.x/abstract

Tate, J. A., D. E. Soltis, and P. S. Soltis. 2005. Polyploidy in Plants in The Evolution of the Genome, T. R. Gregory (ed.), pp. 371-425, Elsevier Inc.

Tate, J. A. and B. B. Simpson. 2004. Breeding system evolution in Tarasa (Malvaceae) and selection for reduced pollen grain size in the polyploid species. American Journal of Botany 91: 207-213. http://www.amjbot.org/content/91/2/207.full

Soltis, D. E., P. S. Soltis, J. C. Pires, A. Kovarik, J. A. Tate, and E. Mavrodiev. 2004. Recent and recurrent polyploidy in Tragopogon (Asteraceae): Genetic, genomic, and cytogenetic comparisons. Biological Journal of the Linnean Society 82: 485-501. http://onlinelibrary.wiley.com/doi/10.1111/j.1095-8312.2004.00335.x/abstract

Simpson, B. B., J. A. Tate, and A. Weeks. 2004. Phylogeny and character evolution of Hoffmannseggia (Caesalpinieae: Caesalpinioideae: Leguminosae). Systematic Botany 29: 933-946. http://dx.doi.org/10.1600/0363644042451044

Soltis, D. E., P. S. Soltis, and J. A. Tate. 2004. Advances in the study of polyploidy since Plant Speciation. New Phytologist 161: 173-191. http://dx.doi.org/10.1046/j.1469-8137.2003.00948.x

Tate, J. A. and B. B. Simpson. 2003. Paraphyly of Tarasa Philippi (Malvaceae) and diverse origins of the polyploid species. Systematic Botany 28: 723-737. *One of the most cited papers published in this journal. http://www.bioone.org/doi/abs/10.1043/02-64.1

Tate, J. A. 2003. Andeimalva: a new genus of Malvaceae from Andean South America. Lundellia 6: 10-18. http://w3.biosci.utexas.edu/prc/Lundellia6.html