Dr Anne Midwinter staff profile picture

Contact details +6469516998

Dr Anne Midwinter

Senior Research Officer

Doctoral Supervisor
School of Veterinary Science

Professional

Contact details

  • Ph: ext 81198
    Location: 2.46, Hopkirk Institute
    Campus: Turitea

Certifications and Registrations

  • Licence, Supervisor, Massey University

Research Expertise

Research Interests

zoonotic disease, food-borne disease, bacterial disease

Thematics

Health and Well-being

Area of Expertise

Field of research codes
Agricultural And Veterinary Sciences (070000):
Bacteriology (060501): Biological Sciences (060000): Infectious Agents (060502): Microbiology (060500): Microbiology not elsewhere classified (060599):
Veterinary Microbiology (excl. Virology) (070707): Veterinary Sciences (070700)

Research Projects

Summary of Research Projects

Position Current Completed
Project Leader 2 22

Research Outputs

Journal

Collis, RM., Biggs, PJ., Burgess, SA., Midwinter, AC., Brightwell, G., & Cookson, AL. (2024). Impact of systemic antimicrobial therapy on the faecal microbiome in symptomatic dairy cows. PLoS ONE. 19(1 January)
[Journal article]Authored by: Biggs, P., Burgess, S., Midwinter, A.
Nouioui, I., Saunderson, SC., Midwinter, AC., Young, MJ., McInnes, KM., Watts, J., . . . Sangal, V. (2023). Corynebacterium megadyptis sp. nov. with two subspecies, Corynebacterium megadyptis subsp. megadyptis subsp. nov. and Corynebacterium megadyptis subsp. dunedinense subsp. nov. isolated from yellow-eyed penguins. International Journal of Systematic and Evolutionary Microbiology. 73(2)
[Journal article]Authored by: Midwinter, A.
Toombs-Ruane, LJ., Marshall, JC., Benschop, J., Drinković, D., Midwinter, AC., Biggs, PJ., . . . Burgess, SA. (2023). Extended-spectrum β-lactamase- and AmpC β-lactamase-producing Enterobacterales associated with urinary tract infections in the New Zealand community: a case-control study. International Journal of Infectious Diseases. 128, 325-334
[Journal article]Authored by: Benschop, J., Biggs, P., Burgess, S., Douwes, J., French, N., Marshall, J., Midwinter, A., Roberts, M.
Kingsbury, JM., Horn, B., Armstrong, B., Midwinter, A., Biggs, P., Callander, M., . . . Biggs, R. (2023). The impact of primary and secondary processing steps on Campylobacter concentrations on chicken carcasses and portions. Food Microbiology. 110
[Journal article]Authored by: Biggs, P., Midwinter, A.
Wilkinson, DA., Rogers, LE., Bell, A., Benschop, J., & Midwinter, AC. (2023). Carriage of Staphylococcus pseudintermedius by clinically normal dogs in Canterbury, New Zealand. New Zealand Veterinary Journal. 71(1), 33-36
[Journal article]Authored by: Benschop, J., Midwinter, A.
Jayasinghe, M., Vallee, E., Bolwell, C., Digby, A., Roe, W., Midwinter, A., . . . Gartrell, B. (2022). ENVIRONMENTAL FACTOR INVESTIGATION OF EXUDATIVE CLOACITIS IN KĀKĀPŌ (STRIGOPS HABROPTILUS) ON WHENUA HOU (CODFISH ISLAND), NEW ZEALAND. Journal of Wildlife Diseases. 58(4), 769-781
[Journal article]Authored by: Gartrell, B., Midwinter, A., Roe, W., Vallee, E.
Davis, MT., Canning, AD., Midwinter, AC., & Death, RG. (2022). Nitrate enrichment does not affect enteropathogenic Escherichia coli in aquatic microcosms but may affect other strains present in aquatic habitats. PeerJ. 10
[Journal article]Authored by: Midwinter, A.
Collis, RM., Biggs, PJ., Burgess, SA., Midwinter, AC., Brightwell, G., & Cookson, AL. (2022). Prevalence and distribution of extended-spectrum β-lactamase and AmpC-producing Escherichia coli in two New Zealand dairy farm environments. Frontiers in Microbiology. 13
[Journal article]Authored by: Biggs, P., Burgess, S., Midwinter, A.
Bojanić, K., Acke, E., Biggs, PJ., & Midwinter, AC. (2022). The prevalence of Salmonella spp. in working farm dogs and their home-kill raw meat diets in Manawatū, New Zealand. New Zealand Veterinary Journal. 70(4), 233-237
[Journal article]Authored by: Biggs, P., Midwinter, A.
Davis, M., Midwinter, AC., Cosgrove, R., & Death, RG. (2021). Detecting genes associated with antimicrobial resistance and pathogen virulence in three New Zealand rivers. PeerJ. 9
[Journal article]Authored by: Midwinter, A.
Bloomfield, SJ., Midwinter, AC., Biggs, PJ., French, NP., Marshall, JC., Hayman, DTS., . . . Benschop, J. (2021). Genomic adaptations of Campylobacter jejuni to long-term human colonization. Gut Pathogens. 13(1)
[Journal article]Authored by: Benschop, J., Biggs, P., Fayaz, A., French, N., Hayman, D., Marshall, J., Midwinter, A.
Greening, SS., Zhang, J., Midwinter, AC., Wilkinson, DA., McDougall, S., Gates, MC., . . . French, NP. (2021). The Genetic Relatedness and Antimicrobial Resistance Patterns of Mastitis-Causing Staphylococcus aureus Strains Isolated from New Zealand Dairy Cattle. Veterinary Sciences. 8(11)
[Journal article]Authored by: French, N., Gates, M., Midwinter, A.
Greening, SS., Zhang, J., Midwinter, AC., Wilkinson, DA., Fayaz, A., Williamson, DA., . . . French, NP. (2021). Transmission dynamics of an antimicrobial resistant Campylobacter jejuni lineage in New Zealand's commercial poultry network. Epidemics. 37
[Journal article]Authored by: Anderson, M., Fayaz, A., French, N., Gates, M., Midwinter, A.
Bloomfield, SJ., Benschop, J., Midwinter, AC., Biggs, PJ., Marshall, JC., Hayman, DTS., . . . French, NP. (2021). Genomic and phenotypic comparison of two Salmonella Typhimurium strains responsible for consecutive salmonellosis outbreaks in New Zealand. International Journal of Medical Microbiology. 311(7)
[Journal article]Authored by: Benschop, J., Biggs, P., Burgess, S., French, N., Hayman, D., Marshall, J., Midwinter, A.
Gray, HA., Biggs, PJ., Midwinter, AC., & Burgess, SA. (2021). Genome sequences for extended-spectrum beta-lactamase-producing escherichia coli strains isolated from different water sources. Microbiology Resource Announcements. 10(24)
[Journal article]Authored by: Biggs, P., Burgess, S., Midwinter, A.
Saunderson, SC., Nouioui, I., Midwinter, AC., Wilkinson, DA., Young, MJ., McInnes, KM., . . . Sangal, V. (2021). Phylogenomic characterization of a novel corynebacterium species associated with fatal diphtheritic stomatitis in endangered yellow-eyed penguins. mSystems. 6(3)
[Journal article]Authored by: Midwinter, A.
Jayasinghe, M., Midwinter, A., Roe, W., Vallee, E., Bolwell, C., & Gartrell, B. (2021). Seabirds as possible reservoirs of erysipelothrix rhusiopathiae on islands used for conservation translocations in New Zealand. Journal of Wildlife Diseases. 57(3), 534-542
[Journal article]Authored by: Gartrell, B., Midwinter, A., Roe, W., Vallee, E.
Gal, A., Barko, PC., Biggs, PJ., Gedye, KR., Midwinter, AC., Williams, DA., . . . Pazzi, P. (2021). One dog’s waste is another dog’s wealth: A pilot study of fecal microbiota transplantation in dogs with acute hemorrhagic diarrhea syndrome. PLoS ONE. 16(4 April)
[Journal article]Authored by: Biggs, P., Midwinter, A.
Springer Browne, A., Midwinter, AC., Withers, AH., Cookson, AL., Biggs, PJ., Marshall, JC., . . . French, NP. (2021). Transmission Dynamics of Shiga Toxin-Producing Escherichia coli in New Zealand Cattle from Farm to Slaughter. Applied and Environmental Microbiology. 87(11), 1-16
[Journal article]Authored by: Benschop, J., Biggs, P., French, N., Marshall, J., Midwinter, A., Nisa, S.
Burgess, SA., Francois, M., Midwinter, AC., & Biggs, PJ. (2021). Draft genome sequences of seven extended-spectrum β-Lactamase-producing escherichia coli strains isolated from New Zealand waterways. Microbiology Resource Announcements. 10(11)
[Journal article]Authored by: Biggs, P., Burgess, S., Midwinter, A.
Burgess, SA., Aplin, J., Biggs, PJ., Breckell, G., Benschop, J., Fayaz, A., . . . Midwinter, AC. (2021). Characterisation of AmpC and extended-spectrum beta-lactamase producing E. coli from New Zealand dairy farms. International Dairy Journal. 117
[Journal article]Authored by: Benschop, J., Biggs, P., Burgess, S., Fayaz, A., Midwinter, A.
Lake, RJ., Campbell, DM., Hathaway, SC., Ashmore, E., Cressey, PJ., Horn, BJ., . . . French, NP. (2021). Source attributed case-control study of campylobacteriosis in New Zealand. International Journal of Infectious Diseases. 103, 268-277
[Journal article]Authored by: Benschop, J., French, N., Marshall, J., Midwinter, A.
Toombs-Ruane, LJ., Benschop, J., French, NP., Biggs, PJ., Midwinter, AC., Marshall, JC., . . . Burgess, SA. (2020). Carriage of Extended-Spectrum-Beta-Lactamase- and AmpC Beta-Lactamase-Producing Escherichia coli Strains from Humans and Pets in the Same Households. Applied and Environmental Microbiology. 86(24), 1-15
[Journal article]Authored by: Benschop, J., Biggs, P., Burgess, S., Douwes, J., Fayaz, A., French, N., Marshall, J., Midwinter, A., Roberts, M.
Bojanić, K., Acke, E., Roe, WD., Marshall, JC., Cornelius, AJ., Biggs, PJ., . . . Midwinter, AC. (2020). Comparison of the pathogenic potential of campylobacter jejuni, C. Upsaliensis and c. helveticus and limitations of using larvae of galleria mellonella as an infection model. Pathogens. 9(9), 1-15
[Journal article]Authored by: Biggs, P., Marshall, J., Midwinter, A., Roe, W.
Crawshaw, TR., Hunter, S., Wilkinson, DA., Rogers, LE., Christensen, NH., & Midwinter, AC. (2021). Isolation of Campylobacter hepaticus from free-range poultry with spotty liver disease in New Zealand. New Zealand Veterinary Journal. 69(1), 58-64
[Journal article]Authored by: Hunter, S., Midwinter, A.
Crump, JA., Thomas, KM., Benschop, J., Knox, MA., Wilkinson, DA., Midwinter, AC., . . . Zadoks, RN. (2021). Investigating the Meat Pathway as a Source of Human Nontyphoidal Salmonella Bloodstream Infections and Diarrhea in East Africa. Clinical Infectious Diseases. 73(7), E1570-E1578
[Journal article]Authored by: Benschop, J., French, N., Knox, M., Midwinter, A., Prinsen, J.
Gilpin, BJ., Walker, T., Paine, S., Sherwood, J., Mackereth, G., Wood, T., . . . Jones, N. (2020). A large scale waterborne Campylobacteriosis outbreak, Havelock North, New Zealand. Journal of Infection. 81(3), 390-395
[Journal article]Authored by: Biggs, P., French, N., Hayman, D., Midwinter, A.
Collis, RM., Biggs, PJ., Midwinter, AC., Browne, AS., Wilkinson, DA., Irshad, H., . . . Cookson, AL. (2020). Genomic epidemiology and carbon metabolism of Escherichia coli serogroup O145 reflect contrasting phylogenies. PLoS ONE. 15(6 June)
[Journal article]Authored by: Biggs, P., French, N., Midwinter, A.
Bloomfield, S., Wilkinson, D., Rogers, L., Biggs, P., French, N., Mohan, V., . . . Midwinter, A. (2020). Campylobacter novaezeelandiae sp. nov., isolated from birds and water in New Zealand. International Journal of Systematic and Evolutionary Microbiology. 70(6), 3775-3784
[Journal article]Authored by: Biggs, P., French, N., Midwinter, A., Savoian, M.
Bojanić, K., Midwinter, AC., Acke, E., Marshall, JC., Cornelius, AJ., & Biggs, PJ. (2020). Draft genome sequences of eight strains of campylobacter helveticus isolated from cats and a dog in New Zealand. Microbiology Resource Announcements. 9(5)
[Journal article]Authored by: Biggs, P., Marshall, J., Midwinter, A.
Nohra, A., Grinberg, A., Marshall, JC., Midwinter, AC., Collins-Emerson, JM., & Frencha, NP. (2020). Shifts in the molecular epidemiology of campylobacter jejuni infections in a sentinel region of new zealand following implementation of food safety interventions by the poultry industry. Applied and Environmental Microbiology. 86(5)
[Journal article]Authored by: Collins-Emerson, J., French, N., Grinberg, A., Marshall, J., Midwinter, A.
Wilkinson, DA., Rogers, LE., Fayaz, A., Akhter, RN., Biggs, PJ., French, NP., . . . Midwinter, AC. (2019). Draft whole-genome sequences of Campylobacter strains isolated from brushtail possums in New Zealand. Microbiology Resource Announcements. 8(47)
[Journal article]Authored by: Biggs, P., Fayaz, A., French, N., Midwinter, A.
French, NP., Zhang, J., Carter, GP., Midwinter, AC., Biggs, PJ., Dyet, K., . . . Williamson, DA. (2019). Genomic analysis of fluoroquinolone- And tetracycline-resistant campylobacter jejuni sequence type 6964 in humans and poultry, New Zealand, 2014-2016. Emerging Infectious Diseases. 25(12), 2226-2234
[Journal article]Authored by: Biggs, P., Fayaz, A., French, N., Midwinter, A.
Shrestha, RD., Midwinter, AC., Marshall, JC., Collins-Emerson, JM., Pleydell, EJ., & French, NP. (2019). Campylobacter jejuni strains associated with wild birds and those causing human disease in six high-use recreational waterways in New Zealand. Applied and Environmental Microbiology. 85(24)
[Journal article]Authored by: Collins-Emerson, J., French, N., Marshall, J., Midwinter, A.
Wilkinson, DA., Midwinter, AC., Kwan, E., Bloomfield, SJ., French, NP., & Biggs, PJ. (2019). Draft whole-genome sequences of three isolates of a novel strain of a Campylobacter sp. Isolated from New Zealand birds and water. Microbiology Resource Announcements. 8(18)
[Journal article]Authored by: Biggs, P., French, N., Midwinter, A.
Browne, AS., Biggs, PJ., Wilkinson, DA., Cookson, AL., Midwinter, AC., Bloomfield, SJ., . . . French, NP. (2019). Use of genomics to investigate historical importation of shiga toxin-producing Escherichia coli serogroup O26 and nontoxigenic variants into New Zealand. Emerging Infectious Diseases. 25(3), 489-500
[Journal article]Authored by: Benschop, J., Biggs, P., French, N., Marshall, J., Midwinter, A.
Wheeler, NE., Blackmore, T., Reynolds, AD., Midwinter, AC., Marshall, J., French, NP., . . . Biggs, PJ. (2019). Genomic correlates of extraintestinal infection are linked with changes in cell morphology in Campylobacter jejuni. Microbial Genomics. 5(2)
[Journal article]Authored by: Biggs, P., French, N., Marshall, J., Midwinter, A., Savoian, M.
Nisa, S., Bercker, C., Midwinter, AC., Bruce, I., Graham, CF., Venter, P., . . . Wilkinson, DA. (2019). Combining MALDI-TOF and genomics in the study of methicillin resistant and multidrug resistant Staphylococcus pseudintermedius in New Zealand. Scientific Reports. 9(1)
[Journal article]Authored by: Benschop, J., French, N., Midwinter, A., Nisa, S.
Bojanić, K., Midwinter, AC., Marshall, JC., Biggs, PJ., & Acke, E. (2019). Isolation of emerging Campylobacter species in working farm dogs and their frozen home-killed raw meat diets. Journal of Veterinary Diagnostic Investigation. 31(1), 23-32
[Journal article]Authored by: Biggs, P., Marshall, J., Midwinter, A.
Collis, RM., Burgess, SA., Biggs, PJ., Midwinter, AC., French, NP., Toombs-Ruane, L., . . . Cookson, AL. (2019). Extended-spectrum beta-lactamase-producing enterobacteriaceae in dairy farm environments: A New Zealand perspective. Foodborne Pathogens and Disease. 16(1), 5-22
[Journal article]Authored by: Biggs, P., Burgess, S., French, N., Midwinter, A.
Wilkinson, DA., O'Donnell, AJ., Akhter, RN., Fayaz, A., Mack, HJ., Rogers, LE., . . . Midwinter, AC. (2018). Updating the genomic taxonomy and epidemiology of Campylobacter hyointestinalis. Scientific Reports. 8, Retrieved from https://www.nature.com/articles/s41598-018-20889-x
[Journal article]Authored by: Biggs, P., Fayaz, A., French, N., Midwinter, A.
Nohra, A., Grinberg, A., Midwinter, AC., Marshall, JC., Collins-Emerson, JM., & French, NP. (2018). Exposure to whole chicken carcasses may present a greater risk of campylobacteriosis compared to exposure to chicken drumsticks. Zoonoses and Public Health. 65(7), 822-830
[Journal article]Authored by: Collins-Emerson, J., French, N., Grinberg, A., Marshall, J., Midwinter, A.
Browne, AS., Midwinter, AC., Withers, H., Cookson, AL., Biggs, PJ., Marshall, JC., . . . French, NP. (2018). Molecular epidemiology of Shiga toxinproducing Escherichia coli (STEC) on New Zealand dairy farms: Application of a culture-independent assay and whole-genome sequencing. Applied and Environmental Microbiology. 84(14)
[Journal article]Authored by: Benschop, J., Biggs, P., French, N., Marshall, J., Midwinter, A.
Browne, AS., Biggs, PJ., Elliott, A., Jaros, P., French, NP., & Midwintera, AC. (2018). Draft wholegenome sequences of three diarrheagenic Escherichia coli strains isolated from farmed deer in New Zealand. Genome Announcements. 6(16)
[Journal article]Authored by: Biggs, P., French, N., Midwinter, A.
Bloomfeld, SJ., Midwinter, AC., Biggs, PJ., French, NP., Marshall, JC., Hayman, DTS., . . . Benschop, J. (2018). Long-term colonization by campylobacter jejuni within a human host: Evolution, antimicrobial resistance, and adaptation. Journal of Infectious Diseases. 217(1), 103-111
[Journal article]Authored by: Benschop, J., Biggs, P., French, N., Hayman, D., Marshall, J., Midwinter, A.
Iraola, G., Forster, SC., Kumar, N., Lehours, P., Bekal, S., García-Peña, FJ., . . . Lawley, TD. (2017). Distinct Campylobacter fetus lineages adapted as livestock pathogens and human pathobionts in the intestinal microbiota. Nature Communications. 8(1)
[Journal article]Authored by: Midwinter, A.
Bloomfield, SJ., Benschop, J., Biggs, PJ., Marshall, JC., Hayman, DTS., Carter, PE., . . . French, NP. (2017). Genomic analysis of salmonella enterica serovar Typhimurium DT160 associated with a 14-year outbreak, New Zealand, 1998–2012. Emerging Infectious Diseases. 23(6), 906-913
[Journal article]Authored by: Benschop, J., Biggs, P., French, N., Hayman, D., Marshall, J., Midwinter, A.
Bojanić, K., Midwinter, AC., Marshall, JC., Rogers, LE., Biggs, PJ., & Acke, E. (2017). Isolation of Campylobacter spp. from Client-Owned Dogs and Cats, and Retail Raw Meat Pet Food in the Manawatu, New Zealand. Zoonoses and Public Health. 64(6), 438-449
[Journal article]Authored by: Biggs, P., Marshall, J., Midwinter, A.
Bojanić, K., Midwinter, AC., Marshall, JC., Rogers, LE., Biggs, PJ., & Acke, E. (2016). Variation in the limit-of-detection of the ProSpecT Campylobacter microplate enzyme immunoassay in stools spiked with emerging Campylobacter species. Journal of Microbiological Methods. 127, 236-241
[Journal article]Authored by: Biggs, P., Marshall, J., Midwinter, A.
Friedrich, A., Marshall, JC., Biggs, PJ., Midwinter, AC., & French, NP. (2016). Seasonality of Campylobacter jejuni isolates associated with human campylobacteriosis in the Manawatu region, New Zealand. Epidemiology and Infection. 144(4), 820-828
[Journal article]Authored by: Biggs, P., French, N., Marshall, J., Midwinter, A.
Acke, E., Midwinter, AC., Lawrence, K., Gordon, SJG., Moore, S., Rasiah, I., . . . Waller, A. (2015). Prevalence of Streptococcus dysgalactiae subsp. equisimilis and S. equi subsp. zooepidemicus in a sample of healthy dogs, cats and horses. New Zealand Veterinary Journal. 63(5), 265-271
[Journal article]Authored by: French, N., Lawrence, K., Midwinter, A.
van Andel, M., Jackson, BH., Midwinter, AC., Alley, MR., Ewen, JG., McInnes, K., . . . French, N. (2015). Investigation of mortalities associated with Salmonella spp. infection in wildlife on Tiritiri Matangi Island in the Hauraki Gulf of New Zealand. New Zealand Veterinary Journal. 63(4), 235-239
[Journal article]Authored by: French, N., Midwinter, A.
Preziuso, S., Pinho, MD., Attili, AR., Melo-Cristino, J., Acke, E., Midwinter, AC., . . . Ramirez, M. (2014). PCR based differentiation between streptococcus dysgalactiae subsp. equisimilis strains isolated from humans and horses. Comparative Immunology, Microbiology and Infectious Diseases. 37(3), 169-172
[Journal article]Authored by: Midwinter, A.
Harland, AL., Cave, NJ., Jones, BR., Benschop, J., Donald, JJ., Midwinter, AC., . . . Collins-Emerson, JM. (2013). A serological survey of leptospiral antibodies in dogs in New Zealand. New Zealand Veterinary Journal. 61(2), 98-106
[Journal article]Authored by: Benschop, J., Collins-Emerson, J., Midwinter, A.
Muellner, P., Marshall, JC., Spencer, SEF., Noble, AD., Shadbolt, T., Collins-Emerson, JM., . . . French, NP. (2011). Utilizing a combination of molecular and spatial tools to assess the effect of a public health intervention. Preventive Veterinary Medicine. 102(3), 242-253
[Journal article]Authored by: Collins-Emerson, J., French, N., Marshall, J., Midwinter, A.
Dorjee, S., Heuer, C., Jackson, R., West, DM., Collins-Emerson, JM., Midwinter, AC., . . . Ridler, AL. (2011). Assessment of occupational exposure to leptospirosis in a sheep-only abattoir. Epidemiology and Infection. 139(5), 797-806
[Journal article]Authored by: Collins-Emerson, J., Midwinter, A., Ridler, A.
DORJEE, S., HEUER, C., JACKSON, R., WEST, DM., COLLINS-EMERSON, JM., MIDWINTER, AC., . . . RIDLER, AL. (2010). Assessment of occupational exposure to leptospirosis in a sheep-only abattoir. Epidemiology and Infection. , 1-10
[Journal article]Authored by: Midwinter, A., Ridler, A.
Müllner, P., Collins-Emerson, JM., Midwinter, AC., Carter, P., Spencer, SEF., Van Der Logt, P., . . . French, NP. (2010). Molecular epidemiology of campylobacter jejuni in a geographically isolated country with a uniquely structured poultry industry. Applied and Environmental Microbiology. 76(7), 2145-2154
[Journal article]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Ayanegui-Alcérreca, MA., Wilson, PR., Collins-Emerson, JM., Heuer, C., Midwinter, AC., Castillo-Alcala, F., . . . Mackintosh, CG. (2010). Regional seroprevalence of leptospirosis on deer farms in New Zealand. New Zealand Veterinary Journal. 58(4), 184-189
[Journal article]Authored by: Castillo Alcala, F., Collins-Emerson, J., Midwinter, A.
Mullner, P., Shadbolt, T., Collins-Emerson, JM., Midwinter, AC., Spencer, SEF., Marshall, J., . . . French, NP. (2010). Molecular and spatial epidemiology of human campylobacteriosis: Source association and genotype-related risk factors. Epidemiology and Infection. 138(10), 1372-1383
[Journal article]Authored by: Collins-Emerson, J., French, N., Marshall, J., Midwinter, A.
Carter, PE., McTavish, SM., Brooks, HJL., Campbell, D., Collins-Emerson, JM., Midwinter, AC., . . . French, NP. (2009). Novel clonal complexes with an unknown animal reservoir dominate Campylobacter jejuni isolates from river water in New Zealand. Applied and Environmental Microbiology. 75(19), 6038-6046
[Journal article]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Spencer, SEF., Wilson, DJ., Jones, G., Noble, AD., Midwinter, AC., . . . French, NP. (2009). Assigning the source of human campylobacteriosis in New Zealand: A comparative genetic and epidemiological approach. Infection, Genetics and Evolution. 9(6), 1311-1319
[Journal article]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Benschop, J., Heuer, C., Jaros, P., Collins-Emerson, J., Midwinter, A., & Wilson, P. (2009). Sero-prevalence of leptospirosis in workers at a New Zealand slaughterhouse. New Zealand Medical Journal. 122(1307), 39-47
[Journal article]Authored by: Benschop, J., Collins-Emerson, J., Midwinter, A.
Dorjee, S., Heuer, C., Jackson, R., West, DM., Collins-Emerson, JM., Midwinter, AC., . . . Ridler, AL. (2009). Are white-spot lesions in kidneys in sheep associated with leptospirosis?. New Zealand Veterinary Journal. 57(1), 28-33
[Journal article]Authored by: Collins-Emerson, J., Midwinter, A., Ridler, A.
French, NP., Midwinter, A., Holland, B., Collins-Emerson, J., Pattison, R., Colles, F., . . . Carter, P. (2009). Molecular epidemiology of campylobacter jejuni isolates from wild-bird fecal material in children's playgrounds. Applied and Environmental Microbiology. 75(3), 779-783
[Journal article]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Dorjee, S., Heuer, C., Jackson, R., West, DM., Collins-Emerson, JM., Midwinter, AC., . . . Ridler, AL. (2008). Prevalence of pathogenic leptospira spp. in sheep in a sheep-only abattoir in New Zealand. New Zealand Veterinary Journal. 56(4), 164-170
[Journal article]Authored by: Collins-Emerson, J., Midwinter, A., Ridler, A.
Ayanegui-Alcerreca, MA., Wilson, PR., Mackintosh, CG., Collins-Emerson, JM., Heuer, C., Midwinter, AC., . . . Castillo-Alcala, F. (2007). Leptospirosis in farmed deer in New Zealand: A review. New Zealand Veterinary Journal. 55(3), 102-108
[Journal article]Authored by: Castillo Alcala, F., Collins-Emerson, J., Midwinter, A.
Kelly, PJ., Midwinter, AC., Rolain, JM., & Raoult, D. (2005). Polymerase chain reaction (PCR) survey for rickettsias and bartonellas in ticks from New Zealand. New Zealand Veterinary Journal. 53(6), 468-469
[Journal article]Authored by: Midwinter, A.
Midwinter, A., Vinh, T., Faine, S., & Adler, B. (1994). Characterization of an antigenic oligosaccharide from Leptospira interrogans Serovar pomona and its role in immunity. Infection and Immunity. 62(12), 5477-5482
[Journal article]Authored by: Midwinter, A.
Midwinter, A., Faine, S., & Adler, B. (1990). Vaccination of mice with lipopolysaccharide (LPS) and LPS-derived immuno-conjugates from Leptospira interrogans. Journal of Medical Microbiology. 33(3), 199-204
[Journal article]Authored by: Midwinter, A.
Midwinter, AC., Clarke, JK., & Alley, MR. (1986). Pasteurella haemolytica serotypes from pneumonic goatlungs. New Zealand Veterinary Journal. 34(3), 35
[Journal article]Authored by: Midwinter, A.

Conference

Burgess, S., Toombs-Ruane, L., Biggs, P., Midwinter, A., & Benschop, J. (2018). Urban waterways a vehicle for the spread of antimicrobial resistant E. coli ?. Poster session presented at the meeting of NZMS-NZSBMB Joint Annual Conference 2018
[Conference Poster]Authored by: Benschop, J., Biggs, P., Burgess, S., Midwinter, A.
Flint, S., Zhang, Y., Mills, J., Midwinter, A., & Gupta, T. (2018). Inhibition of quorum sensing in spoilage bacteria by molecular regulation and its effect on spoilage behaviour. Poster session presented at the meeting of New Zealand Microbiological Society Conference
[Conference Poster]Authored by: Flint, S., Midwinter, A.
Wilkinson, DA., O'Donnell, AJ., Akhter, RN., Fayaz, A., MacK, HJ., Rogers, LE., . . . Midwinter, AC. (2018). Updating the genomic taxonomy and epidemiology of Campylobacter hyointestinalis.
[Conference Poster]Authored by: Biggs, P., Fayaz, A., French, N., Midwinter, A.
Flint, SH., Zhang, Y., Mills, J., Gupta, T., & Midwinter, A.Identification and understanding the roles of quorum sensing in New Zealand exported lamb. . Auckland
[Conference Paper]Authored by: Flint, S., Midwinter, A.Contributed to by: Flint, S.
Burgess, SA., Aplin, J., Biggs, P., Benschop, J., & Midwinter, A. (2017, December). New Zealand dairy cattle – a reservoir for antimicrobial resistant Serratia spp. Presented at One Health Aotearoa 3rd Symposium. Wellington, New Zealand.
[Conference Oral Presentation]Authored by: Benschop, J., Biggs, P., Burgess, S., Midwinter, A.
Wheeler, N., Biggs, PJ., Blackmore, T., Reynolds, A., Midwinter, A., Marshall, J., . . . French, N. (2017). Identification of genomic changes associated with invasiveness in campylobacter jejuni. , 19th International workshop on campylobacter, Helicobacter and related organisms
[Conference Abstract]Authored by: Biggs, P., French, N., Marshall, J., Midwinter, A.
Cornelius, A., Biggs, PJ., Hayman, D., French, N., Draper, J., Wilkinson, D., . . . Gilpin, B. (2017). use of genotyping tools to characterise and investigate the New Zealand Havelock North campylobacteriosis outbreak. , 19th international workshop on campylobacter, helicobacter and related organisms
[Conference Abstract]Authored by: Biggs, P., French, N., Hayman, D., Marshall, J., Midwinter, A.
Zhang, J., Biggs, P., Wilkinson, D., Midwinter, A., Gilpin, B., Draper, J., . . . French, N. (2017, September). Ad hoc whole-genome MLST (wgMLST) analysis reveals multiple Campylobacter jejuni clones caused a massive waterborne outbreak in New Zealand in 2016. Presented at 19th International Workshop on Campylobacter, Helicobacter and Related Organisms. Nantes, France.
[Conference Oral Presentation]Authored by: Biggs, P., French, N., Hayman, D., Midwinter, A.
Zhang, J., Williamson, D., Gonçalves da Silva, A., Patrick, B., Bulach, D., Carter, G., . . . French, NIGEL. (2017). Genomic analysis of the recently emerged antimicrobial resistant Campylobacter jejuni ST-6964 in New Zealand. Poster session presented at the meeting of 19th International Workshop on Campylobacter, Helicobacter and Related Organisms. Nantes, France
[Conference Poster]Authored by: French, N., Midwinter, A.
Browne, A., Midwinter, A., Withers, H., Cookson, A., Biggs, P., Marshall, J., . . . French, N. (2016). Epidemiology of shiga toxin-producing E. coli (STEC) on New Zealand dairy farms using new molecular and genomic technologies. 2016 Proceedings of Food Safety, Animal Welfare and Biosecurity Branch of the NZVA Conference. (pp. 21 - 25). Palmerston North, New Zealand: Food Safety, Animal Welfare and Biosecurity Branch of the New Zealand Veternary Animal Science Conference
[Conference Paper in Published Proceedings]Authored by: Benschop, J., Biggs, P., French, N., Marshall, J., Midwinter, A.
Nohra, A., Grinberg, A., Midwinter, AC., Marshall, JC., Collins-Emerson, JM., & French, NP. (2016). Molecular epidemiology of Campylobacter coli strains isolated from different sources in New Zealand between 2005 and 2014.
[Conference Poster]Authored by: Collins-Emerson, J., French, N., Grinberg, A., Marshall, J., Midwinter, A.
French, NP., Biggs, R., Biggs, PJ., Bloomfield, S., Dyet, K., Gilpin, BJ., . . . Williamson, DE. (2015). Rapid emergence of tetracycline and fluoroquinolone resistant Campylobacter jejuni ST-6964 in poultry and humans in New Zealand. Campylobacter, Helicobacter & Related Organisms (CHRO) : 18th International Workshop 2015, 1-5 November 2015, Rotorua, New Zealand : delegate handbook. (pp. 109 - 109). : 18th International Conference on Campylobacter, Helicobacter, and Related Organisms
[Conference Paper in Published Proceedings]Authored by: Biggs, P., French, N., Midwinter, A.
Bloomfield, S., Benschop, J., Midwinter, AC., Biggs, P., Marshall, J., Hayman, D., . . . French, N. (2015). Evolution of Campylobacter in a persistently infected human host. : 18th International Conference on Campylobacter, Helicobacter, and Related Organisms
[Conference Paper in Published Proceedings]Authored by: Benschop, J., Biggs, P., French, N., Hayman, D., Marshall, J., Midwinter, A.
Biggs, PJ., Blackmore, T., Reynolds, AD., Midwinter, AC., & French, NP. (2015). Comparative genomic analysis of human bacteraemic Campylobacter jejuni isolates from New Zealand. Proceedings of the 18th International workshop on Campylobacter, Helicobacter & Related Organisms - CHRO 2015. ER - .... (pp. 29 - 29). : 18th International Conference on Campylobacter, Helicobacter, and Related Organisms
[Conference Paper in Published Proceedings]Authored by: Biggs, P., French, N., Midwinter, A.
Bojanic, K., Midwinter, AC., Biggs, PJ., Marshall, JC., & Acke, E. (2015). Pathogenicity of Campylobacter jejuni, C. upsaliensis and C. helveticus in the invertebrate disease model Galleria mellonella. Proceedings of the 18th International workshop on Campylobacter, Helicobacter & Related Organisms. (pp. 38 - 38). New Zealand: 18th International Conference on Campylobacter, Helicobacter, and Related Organisms
[Conference Paper in Published Proceedings]Authored by: Biggs, P., Marshall, J., Midwinter, A.Contributed to by: Midwinter, A.
Friedrich, A., Marshall, JC., Biggs, PJ., Midwinter, AC., & French, NP. (2015). Short-term evolutionary dynamics of Campylobacter jejuni in chickens. Poster session presented at the meeting of 18th International workshop on Campylobacter, Helicobacter and Related Organisms. Rotorua, New Zealand
[Conference Poster]Authored by: Biggs, P., French, N., Marshall, J., Midwinter, A.
Friedrich, A., Biggs, P., Midwinter, A., & French, N. (2013, September). Use of microarrays to identify phenotypic variation in specific sequence types of Campylobacter jejuni. Presented at 17th International Workshop on Campylobacter, Helicobacter and Related Organisms. Aberdeen, Scotland.
[Conference Oral Presentation]Authored by: Biggs, P., French, N., Midwinter, A.
Bojanic, K., Midwinter, A., Marshall, J., Biggs, P., Benschop, J., & Acke, E. (2013, September). Comparison of culture methods for campylobacter spp. in working farm dogs and their home-kill meat diets. Presented at 17th International Workshop on Campylobacter, Helicobacter and related organisms. Aberdeen, United Kingdom.
[Conference Oral Presentation]Authored by: Benschop, J., Biggs, P., Marshall, J., Midwinter, A.
Biggs, PJ., Collins-Emerson, J., Midwinter, A., Fearnhead, P., Jolley, K., Maiden, M., . . . French, N. (2013). The pathogenomics of campylobacter jejuni in New Zealand. (pp. 43 - 43). , 17th International workshop on Campylobacter, Helicobacter and related organisms: Society for General Microbiology
[Conference Abstract]Authored by: Biggs, P., Collins-Emerson, J., French, N., Midwinter, A.
Benschop, J., Dreyfus, A., Sanhueza, J., Harland, A., Collins-Emerson, J., Fang, F., . . . Wilson, P. (2013, March). Leptospirosis in New Zealand: "In the first week I thought I would die and then I wished that I had.". Presented at World Small Animal Veterinary Association 38th Annual Congress. Auckland, New Zealand.
[Conference Oral Presentation]Authored by: Benschop, J., Collins-Emerson, J., French, N., Midwinter, A., Vallee, E.
Bojanic, K., Midwinter, AC., Biggs, P., Marshall, J., Benschop, J., Cave, N., . . . Acke, E. (2013). Salmonella,E.coli and campylobacter spp. in working farm dogs in New Zealand and their home-kill diets. In P. Angus-Cook, K. Crews, N. Dymond, N. Harding, J. Hunnam, S. Marshall, . . . V. Williams (Eds.) Proceedings of the New Zealand Veterinary Association Annual Conference. (pp. 13 - 14). : New Zealand Veterinary Association Annual Conference, The Science Behind Veterinary Practice
[Conference Paper in Published Proceedings]Authored by: Benschop, J., Biggs, P., Marshall, J., Midwinter, A.
Biggs, PJ., Collins-Emerson, J., Midwinter, A., Kwan, E., Fearnhead, P., & French, N. (2013). The application of ribosomal multilocus sequence typing (rMLST) in epidemiological studies. In P. Angus-Cook, K. Crews, N. Dymond, N. Harding, J. Hunnam, S. Marshall, . . . V. Williams (Eds.): New Zealand Veterinary Association Annual Conference
[Conference Paper in Published Proceedings]Authored by: Biggs, P., Collins-Emerson, J., French, N., Midwinter, A.
Bojanic, K., Midwinter, A., Rogers, LE., & Acke, E. (2013). Campylobacter spp. in healthy dogs and cats in Manawatu, New Zealand. In WSAVA FASAVA 2013 Congress Handbook(pp. 582 - 582). , World Small Animal Veterinary Association [WSAVA] and Federation of Asian Small Animal Veterinary Association [FASAVA] 38th Annual Congress New Zealand: World Small Animal Veterinary Association
[Conference Abstract]Authored by: Midwinter, A.
Bojanic, K., Midwinter, A., Biggs, P., Benschop, J., Cave, N., & Acke, E.(2013, February 18). Salmonella E.Coli and Campylobacter SPP. in working farm dogs in New Zealand and their home-kill diets. In 8th International Sheep Veterinary Congress: Handbook(pp. 70 - 70). , 8th International Sheep Veterinary Congress: Connecting Sheep and Science New Zealand: International Sheep Veterinary Congress
[Conference Abstract]Authored by: Benschop, J., Biggs, P., Midwinter, A.
Bojanic, K., Midwinter, A., Biggs, P., Benschop, J., Cave, N., & Acke, E. (2013, February). Salmonella E.Coli and Campylobacter SPP. in working farm dogs in New Zealand and their home-kill diets. Presented at 8th International Sheep Veterinary Congress: Connecting Sheep and Science. Rotorua, New Zealand.
[Conference Oral Presentation]Authored by: Benschop, J., Biggs, P., Midwinter, A.
Shrestha, RD., Midwinter, A., Collins-Emerson, J., Pleydell, EJ., Prattley, D., & French, N. (2012). Molecular epidemiology of Campylobacter jejuni found in high-use recreational rivers in the Manawatu, New Zealand. In First Infectious Disease Research Centre [IDReC] Science Symposium: Delegate Handbook(pp. 69 - 69). , First Infectious Disease Research Centre [IDReC] Science Symposium New Zealand: Infectious Disease Research Centre
[Conference Abstract]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Hiscox, J., Midwinter, A., & Castro, I. (2012). Microbial penetration through the avian egg: Are microbes contributing to the decline of our national icon, the kiwi (Apteryx mantelli)?. In First Infectious Disease Research Centre [IDReC] Science Symposium: Delegate Handbook(pp. 55 - 55). , First Infectious Disease Research Centre [IDReC] Science Symposium New Zealand: Infectious Disease Research Centre, Massey University
[Conference Abstract]Authored by: Castro, I., Midwinter, A.
George, T., Midwinter, AC., Biggs, P., Cookson, A., & French, N. (2012). Pheno-genotypic characterisation of New Zealand associated Escherishia coli O157:H7 isolates. In First Infectious Disease Research Centre [IDReC] Science Symposium: Delegate Handbook(pp. 51 - 51). , First Infectious Disease Research Centre [IDReC] Science Symposium New Zealand: Infectious Disease Research Centre, Massey University
[Conference Abstract]Authored by: Biggs, P., French, N., Midwinter, A.
Bojanic, K., Midwinter, A., Rogers, LE., Biggs, P., & Acke, E. (2012). Prospect® Campylobacter microplate assay detection of C upsaliensis, C helveticus and C hyointestinalis in spiked human clinical faecal samples. In First Infectious Disease Research Centre [IDReC] Science Symposium: Delegate Handbook(pp. 44 - 44). , First Infectious Disease Research Centre [IDReC] Science Symposium New Zealand: Infectious Disease Research Centre, Massey University
[Conference Abstract]Authored by: Biggs, P., Midwinter, A.
Hiscox, J., Castro, I., Midwinter, A., & Jamieson, S. (2012). Are microbes contributing to the decline of our national icon, the kiwi?. In New Zealand Ecological Society Conference 2012: Is New Zealand Ecology on Solid Foundations?: Programme and Abstracts(pp. 57 - 57). , New Zealand Ecological Society Conference 2012: Is New Zealand Ecology on Solid Foundations? New Zealand: New Zealand Ecological Society
[Conference Abstract]Authored by: Castro, I., Midwinter, A.
Shrestha, RD., Midwinter, A., Collins-Emerson, J., Pleydell, E., Prattley, D., & French, N. (2012). Molecular epidemiology of Campylobacter jejuni found in high-use recreational rivers in the Manawatu, New Zealand. Poster session presented at the meeting of 1st Infectious Disease Research Centre [IDReC] Science Symposium. Palmerston North, New Zealand
[Conference Poster]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Balm, M., Collins-Emerson, J., Midwinter, A., Biggs, P., & French, N. (2012). Host association and evolution of Campylobacter species in native rails: An endeavour teacher fellowship experience. Poster session presented at the meeting of First Infectious Disease Research Centre [IDReC] Science Symposium. Palmerston North, New Zealand
[Conference Poster]Authored by: Biggs, P., Collins-Emerson, J., French, N., Midwinter, A.
Lawrence, K., Acke, E., Midwinter, A., Gordon, S., Moore, S., Waller, A., . . . French, N. (2012). Epidemiology of Streptococcus zooepidemicus infection in dogs in New Zealand. Poster session presented at the meeting of 13th International Symposium on Veterinary Epidemiology and Economics [ISVEE XIII]: Building Bridges Crossing Borders. Maastricht, Netherlands
[Conference Poster]Authored by: French, N., Lawrence, K., Midwinter, A.
Lawrence, K., Acke, E., Midwinter, A., Gordon, S., Moore, S., Waller, A., . . . French, N. (2012). Epidemiology of Streptococcus zooepidemicus infection in dogs in New Zealand. In Book of Abstrcts of the 13th International Symposium on Veterinary Epidemiology and Economics(pp. 239 - 239). , 13th International Symposium on Veterinary Epidemiology and Economics [ISVEE XIII]: Building Bridges Crossing Borders The Netherlands: Wageningen Academic Publishers
[Conference Abstract]Authored by: French, N., Lawrence, K., Midwinter, A.
Reynolds, S., Alley, M., Castro, I., & Midwinter, A. (2011). A small gland with promising traits: Are Hihi (Notiomystis cincta) and Kiwi (Apteryx spp) disinfecting their nests from within?. In New Zealand Society for Parasitology Annual Meeting No. 39: Conference Abstracts(pp. 12 - 13). , New Zealand Society for Parasitology Annual Meeting No. 39 New Zealand: New Zealand Society for Parasitology
[Conference Abstract]Authored by: Castro, I., Midwinter, A.
Hiscox, J., Castro, I., Midwinter, A., Jamieson, S., & French, N. (2011). Are microbes contributing to the decline of our NZ icon? A preliminary investigation into the microorganisms of brown kiw (Apteryx mantelli) eggs. In New Zealand Society for Parasitology Annual Meeting No. 39: Conference Abstracts(pp. 11 - 11). , New Zealand Society for Parasitology Annual Meeting No. 39 New Zealand: New Zealand Society for Parasitology
[Conference Abstract]Authored by: Castro, I., French, N., Midwinter, A.
Acke, E., Midwinter, A., Collins-Emerson, J., & French, N. (2011). Campylobacter species and multilocus sequence types from commercial raw meat diets for pets. In PJJ. Mandigers, & AJ. German (Eds.) Congress Proceedings- The European College of Veterinary Internal Medicine- Companion Animals 2011. (pp. 208 - 208). : 21st European College of Veterinary Internal Medicine- Companion Animals Congress
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Acke, E., Midwinter, A., Collins-Emerson, J., & French, N. (2011, September). Campylobacter species and multilocus sequence types from commercial raw meat diets for pets. Presented at 21st European College of Veterinary Internal Medicine- Companion Animals Congress. Seville, Spain.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Ayanegui-Alcerreca, MA., Wilson, PR., Heuer, C., Collins-Emerson, J., Castillo-Alcala, F., & Midwinter, A. (2011, September). Serological responses to a trivalent leptospiral vaccine in pregnant hinds and progeny. Presented at VII Reunion de la International Leptospirosis Society. Merida, Yucatan, Mexico.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., Midwinter, A.
Ayanegui-Alcerreca, MA., Wilson, PR., Heuer, C., Collins-Emerson, J., Castillo-Alcala, F., & Midwinter, A.(2011, September 19). Serological responses to a trivalent leptospiral vaccine in pregnant hinds and progeny. , VII Reunion de la International Leptospirosis Society
[Conference Abstract]Authored by: Collins-Emerson, J., Midwinter, A.
French, N., Collins-Emerson, JM., Midwinter, A., Biggs, P., Mohan, V., Muellner, P., . . . Carter, P. (2011, November). The evolution, epidemiology and control of enteric zoonoses in New Zealand. Presented at New Zealand Microbiological Society Conference 2011. Palmerston North, New Zealand.
[Conference Oral Presentation]Authored by: Biggs, P., Collins-Emerson, J., French, N., Midwinter, A.
French, N., Collins-Emerson, JM., Midwinter, A., Biggs, P., Mohan, V., Muellner, P., . . . Carter, P.(2011, November 23). The evolution, epidemiology and control of enertic zoonoses in New Zealand. (pp. 128 - 128). , New Zealand Microbiological Society Conference 2011
[Conference Abstract]Authored by: Biggs, P., Collins-Emerson, J., Midwinter, A.
Midwinter, A., Moore, S., Rogers, L., Acke, E., & French, N.(2011, November 24). Raw pet food; a potential source of human campylobacteriosis. (pp. 114 - 114). , 2011 New Zealand Mircobiological Society Annual Conference
[Conference Abstract]Authored by: French, N., Midwinter, A.
Acke, E., Midwinter, A., Moore, S., Collins-Emerson, J., & French, N.(2011, December 2). Campylobacter spp. isolation from commercial raw meat diets for pets in New Zealand. , Companion Animal Patron's Day
[Conference Abstract]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Midwinter, AC., Moore, S., Rogers, L., Acke, E., & French, N. (2011, November). Raw pet food; a potential source of human campylobacteriosis. Presented at New Zealand Microbiological Society Conference 2011. Palmerston North, New Zealand.
[Conference Oral Presentation]Authored by: Midwinter, A.
Biggs, PJ., Collins-Emerson, J., Friedrich, A., Kwan, E., Midwinter, A., & French, NP.(2011, November 23). The movement of DNA in and out of Campylobacter spp.- CRISPRs and the analysis of full length MLST genes. (pp. 96 - 96). , New Zealand Microbiological Society Conference 2011
[Conference Abstract]Authored by: Biggs, P., Collins-Emerson, J., French, N., Midwinter, A.
Biggs, PJ., Collins-Emerson, J., Friedrich, A., Kwan, E., Midwinter, A., & French, NP. (2011, November). The movement of DNA in and out of Campylobacter spp.- CRISPRs and the analysis of full length MLST genes. Presented at New Zealand Microbiological Society Conference 2011. Palmerston North, New Zealand.
[Conference Oral Presentation]Authored by: Biggs, P., Collins-Emerson, J., French, N., Midwinter, A.
Carter, P., Collins-Emerson, JM., Midwinter, A., Cookson, A., Biggs, P., & French, N. (2011). A new campylobacter species identified in water and wild birds (Rallidae) in New Zealand. Poster session presented at the meeting of 16th International Workshop on Campylobacter, Helicobacter and Related Organisms. Vancouver, Canada
[Conference Poster]Authored by: Biggs, P., Collins-Emerson, J., French, N., Midwinter, A.
French, N., Mullner, P., Carter, P., Collins-Emerson, JM., Midwinter, A., Spencer, S., . . . Shadbolt, T. (2011, August). The changing epidemiology of campylobacteriosis in New Zealand following interventions in the poultry industry. Presented at 16th International Workshop on Campylobacter, Helicobacter and Related Organisms. Vancouver, Canada.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., French, N., Marshall, J., Midwinter, A.
French, N., Mullner, P., Carter, P., Collins-Emerson, JM., Midwinter, A., Spencer, S., . . . Campbell, D.(2011, August 28). The changing epidemiology of campylobacteriosis in New Zealand following interventions in the poultry industry. (pp. 31 - 31). , 16th International Workshop on Campylobacter, Helicobacter and Related Organsims
[Conference Abstract]Authored by: Collins-Emerson, J., French, N., Marshall, J., Midwinter, A.
Acke, E., Midwinter, A., Gordon, SJ., Lawrence, K., Moore, S., Waller, A., . . . French, N.(2011). Epidemiology of Streptococcus zooepidemicus infections. . Denver, Colorado, United States of America
[Conference Paper]Authored by: French, N., Lawrence, K., Midwinter, A.
Acke, E., Midwinter, A., Gordon, SJ., Lawrence, K., Moore, S., Waller, A., . . . French, N. (2011, June). Epidemiology of streptococcus zooepidemicus infections. Presented at American College of Veterinary Internal Medicine (ACVIM) Forum. Denver, Colorado, United States of America.
[Conference Oral Presentation]Authored by: French, N., Midwinter, A.
Heuer, C., Dreyfus, A., Wilson, P., Benschop, J., Subharat, S., Ayanegui Alcerreca, M., . . . Midwinter, A.(2010). Epidemiology and control of leptospirosis in New Zealand. Paper presented at the meeting of Society for Veterinary Epidemiology and Preventive Medicine. Nantes, France
[Conference Paper]Authored by: Benschop, J., Collins-Emerson, J., Midwinter, A., Subharat, S.
Mullner, P., Collins-Emerson, JM., Midwinter, A., Carter, P., Spencer, SEF., van der Logt, P., . . . French, N.(2009, September 2). Epidemiology and population structure of Campylobater jejuni in New Zealand; a geographically isolated country with a unique poultry industry. (pp. 64 - 64). , 15th International workshop on Campylobacter, Helicobacter, and related organisms
[Conference Abstract]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, PM., Collins-Emerson, JM., Midwinter, AJ., Carter, P., Spencer, SEF., van der Logt, P., . . . French,, N. (2009, September). Epidemiology and population structure of Campylobacter jejuni in New Zealand; a geographically isolated country with a unique poultry industry.. Presented at 15th International Workshop on Campylobacter, Heliocobacter, and Related Organisms.. Toki Messe, Niigata, Japan.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Carter, PE., McTavish, S., Brooks, HJL., Collins-Emerson, JM., Midwinter, AC., & French, NP. (2009). Novel clonal complexes associated with New Zealand river water Campylobacter jejuni. Poster session presented at the meeting of Toki Messe, Niigata, Japan. Toki Messe, Niigata, Japan
[Conference Poster]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Shadbolt, T., Spencer, S., Jones, G., Noble, A., Collins Emerson, J., . . . French, N. (2009). Enhanced surveillance to identify the origin of human campylobacteriosis in New Zealand: Conclusions from an interdisciplinary sentinel surveillance study. Proceedings of the 12th International Symposium on Veterinary Epidemiology and Economics. (pp. 1 - 1).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Shadbolt, T., Spencer, S., Jones, G., Noble, A., Collins Emerson, J., . . . French, N. (2009, August). Enhanced surveillance to identify the origin of human Campylobateriosis in New Zealand: Conclusions from an interdisciplinary sentinel surveillance study. Presented at 12th International Symposium on Veterinary Epidemiology and Economics. Durban, South Africa.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Collins Emerson, J., Midwinter, A., Carter, P., Cook, R., Hathaway, S., . . . French, N. (2009). Structured parallel studies of the molecular epidemiology of Campylobacter jejuni in environmental and food sources reveal insight into the importance and interconnection of different reservoirs. Proceedings of the 12th Symposium of the International Society for Veterinary Epidemiology and Economics. (pp. 1 - 1).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Collins Emerson, J., Midwinter, A., Carter, P., Cook, R., Hathaway, S., . . . French, N. (2009, August). Structured parallel studies of the molecular epidemiology of Campylobacter jejuni in environmental and food sources reveal insight into the importance and interconnection of different reservoirs. Presented at 12th International Symposium on Veterinary Epidemiology and Economics. Durban, South Africa.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Spencer, S., Jones, G., Noble, A., Wilson, D., Collins Emerson, J., . . . French, N. (2009). Attribution of campylobacteriosis in New Zealand: Approaches, results and outlook. Proceedings of the 12th Symposium of the International Society for Veterinary Epidemiology and Economics. (pp. 1 - 1).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Spencer, S., Jones, G., Noble, A., Wilson, D., Collins Emerson, J., . . . French, N. (2009, August). Attribution of Campylobacteriosis in New Zealand: Approaches, results and outlook. Presented at 12th International Symposium on Veterinary Epidemiology and Economics. Durban, South Africa.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Benschop, J., Heuer, C., Collins Emerson, J., Midwinter, A., Wilson, P., French, N., . . . Holt, N. (2009). Epidemiological and laboratory investigations of leptospirosis in New Zealand: working at the human-animal interface. In Australasian Epidemiological Association Annual Scientific Meeting(pp. 65 - 66). : Australasian Epidemiological Association
[Conference Abstract]Authored by: Benschop, J., Collins-Emerson, J., French, N., Midwinter, A.
Benschop, J., Jaros, P., Collins Emerson, JM., Midwinter, AC., Wilson, PR., Nulsen, MF., . . . Heuer, C. (2008). Investigating leptospirosis in New Zealand meat-workers: challenges and preliminary results. Proceedings of the Combined Meeting of the Food Safety, Animal Welfare & Biosecurity and Epidemiology & Animal Health Management. (pp. 203 - 210).
[Conference Paper in Published Proceedings]Authored by: Benschop, J., Collins-Emerson, J., Midwinter, A.
Heuer, C., Wilson, PR., Benschop, J., Subharat, S., Collins Emerson, JM., & Midwinter, AC. (2008). Leptospirosis-a rising public health hazard?. Proceedings of the Combined Meeting of the Food Safety, Animal Welfare & Biosecurity and Epidemiology & Animal Health Management Branches of the New Zealand Veterinary Association. (pp. 101 - 106).
[Conference Paper in Published Proceedings]Authored by: Benschop, J., Collins-Emerson, J., Midwinter, A.
Mullner, P., Collins Emerson, JM., Midwinter, AC., Spencer, S., & French, NP. (2008). Molecular and modeling tools for campylobacter source attribution. Proceedings of the Combined Meeting of the Food Safety, Animal Welfare & Biosecurity and Epidemiology & Animal Health Management Branches of the New Zealand Veterinary Association. (pp. 83 - 90).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Pleydell, EJ., Shadbolt, T., Collins Emerson, JM., Midwinter, AC., Spencer, S., . . . French, NP. (2008). Working at the human and animal health interface- A multidisciplinary team approach towards reducing New Zealand's Campylobacteriosis problem. Proceedings of the Combined Meeting of the Food Safety, Animal Welfare & Biosecurity and Epidemiology & Animal Health Management Branches of the New Zealand Veterinary Association. (pp. 11 - 15).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
French, NP., Midwinter, A., Holland, B., Collins-Emerson, J., Pattison, R., & Carter, P. (2007). Molecular epidemiology of Campylobacter jejuni isolated from wild bird faecal material in children's play areas.
[Conference Poster]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Carter, P., Midwinter, AC., Collins Emerson, JM., Pattison, RS., & French, NP. (2007, February). Source attribution of Campylobacter jejuni by using molecular epidemiology. Presented at Epidemiology & Animal Health Management Branch of the NZVA: Veterinary Epidemiology Seminar. Palmerston North, NZ.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Ayanengui, A., Wilson, PR., Heuer, C., Mackintosh, C., Castillo Alcala, F., Collins Emerson, JM., . . . Midwinter, AC.(2007). Epidemiologia de leptospirosis (Hardjobovis y Pomona) en el ciervo rojo (Cervus elaphus) de granja en Nueva Zelandia [Leptospirosis epidemiology (Hardjobovis y Pomona) in the New Zealand farmed red deer (Cervus elaphus)]. Paper presented at the meeting of Memorias del V Congreso Internacional de Epidemiologia [Proceedings of the 5th International Epidemiology Congress]. Villahermosa, Tabasco, Mexico
[Conference Paper]Authored by: Collins-Emerson, J., Midwinter, A.
Ayanegui-Alcerreca, MA., Wilson, PR., Heuer, C., Collins Emerson, JM., Mackintosh, CG., Midwinter, AC., . . . Castillo Alcala, F. (2007). Epidemiological studies of leptospirosis in New Zealand farmed red deer. In 5th Meeting of the International Leptospirosis Society(pp. 45). : Universidad San Francisco de Quito
[Conference Abstract]Authored by: Collins-Emerson, J., Midwinter, A.
Ayanegui Alcerreca, MA., Wilson, PR., Heuer, C., Collins Emerson, JM., Mackintosh, CG., Midwinter, AC., . . . Castillo Alcala, F. (2007, September). Epidemiological studies of leptospirosis in New Zealand farmed red deer. Presented at 5th Meeting of the International Leptospirosis Society. Quito, Ecuador.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., Midwinter, A.
Wilson, PR., Ayanegui Alcerreca, MA., Subharat, S., Collins Emerson, JM., Smythe, L., Dohnt, M., . . . Mackintosh, CG. (2007, September). Leptospirosis and Leptospira serovars on deer farms in New Zealand. Presented at 5th Meeting of the International Leptospirosis Society. Quito, Ecuador.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., Midwinter, A.
Wilson, PR., Ayanegui-Alcerreca, MA., Subharat, S., Collins Emerson, JM., Smythe, L., Dohnt, M., . . . Mackintosh, CG. (2007). Leptospirosis and Leptospira serovars on deer farms in New Zealand. In 5th Meeting of the International Leptospirosis Society(pp. 44). : Universidad San Francisco de Quito
[Conference Abstract]Authored by: Collins-Emerson, J., Midwinter, A.
Mullner, P., Carter, P., Midwinter, AC., Collins Emerson, JM., Pattison, RS., & French, NP. (2007). Source attribution of Campylobacter jejuni by using molecular epidemiology. Proceedings of the Epidemiology & Animal Health Management Branch of the NZVA, Veterinary Epidemiology Seminar. (pp. 69 - 72).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Mullner, P., Carter, P., Midwinter, AC., Collins-Emerson, J., Pattison, R., & French, NP. (2006). Molecular epidemiology of Campylobacter jejuni: comparing multilocus sequence types from humans and poultry. Proceedings of the 11th Symposium of the International Society for Veterinary Epidemiology and Economics. : 11th Symposium of the International Society for Veterinary Epidemiology anf Economics
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., French, N., Midwinter, A.
Dorjee, S., Ridler, AL., Ayanegui-Alcerreca, MA., Collins-Emerson, JM., Midwinter, A., West, D., . . . Heuer, C. (2006, August). Exposure assessment of occupational leptospirosis. Presented at 11th Symposium of the International Society for Veterinary Epidemiology and Economics. Cairns, Australia.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., Midwinter, A., Ridler, A.
Heuer, C., Dorjee, S., Ridler, AL., Ayanegui-Alcerreca, MA., Collins-Emerson, J., Midwinter, A., . . . Wilson, P. (2006, January). Human health and leptospirosis. Presented at The 14th FAVA Congress and the Food Safety and Biosecurity, Epidemiology and Animal Health Management Branches of the New Zealand Veterinary Association. New Zealand.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., Midwinter, A., Ridler, A.
Heuer, C., Dorjee, S., Ridler, A., Ayanegui Alcerreca, M., Collins Emerson, J., Midwinter, A., . . . Wilson, P. (2006). Human health and leptospirosis. Proceedings of the 14th FAVA Congress and the Food Safety & Biosecurity, and Epidemiology & Animal Health Management Branches of the NZVA. (pp. 47 - 51). : 14th FAVA Congress and the Food Safety & Biosecurity, and Epidemiology & Animal Health Management Branches of the NZVA
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., Midwinter, A., Ridler, A.
Ayanegui Alcerreca, MA., Wilson, PR., Mackintosh, CG., Collins Emerson, JM., Heuer, C., Midwinter, AC., . . . Castillo Alcala, F. (2006). Epidemiology of Leptospiral infections with Serovars Hardjobovis, Pomona and Copenhageni in farmed red deer (Cervus elaphus) in New Zealand. In L. Bartos, A. Dusek, R. Kotrba, & J. Bartosova Vichova (Eds.) Advances in Deer Biology: Deer in a Changing World. Proceedings of the 6th International Deer Biology Congress. (pp. 71).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., Midwinter, A.
Ayanegui-Alcerreca, MA., Wilson, PR., Heuer, C., Collins Emerson, JM., Mackintosh, CG., Midwinter, AC., . . . Castillo Alcala, F. (2006). An international review of Leptospirosis in wild and farmed deer. In L. Bartos, A. Dusek, R. Kotrba, & J. Bartosova Vichova (Eds.) Advances in Deer Biology: Deer in a Changing World. Proceedings of the 6th International Deer Biology Congress. (pp. 70).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., Midwinter, A.
Dorjee, S., Ridler, A., Ayanegui Alcerreca, MA., Collins Emerson, JM., Midwinter, AC., West, DM., . . . Heuer, C. (2006). Exposure assessment of occupational leptospirosis. Proceedings of the 11th International Symposium on Veterinary Epidemiology and Economics. (pp. 732).
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., Midwinter, A., Ridler, A.
Heuer, C., Dorjee, S., Ridler, AL., Ayanegui Alcerreca, MA., Collins Emerson, JM., Midwinter, AC., . . . Wilson, PR. (2005). Human occupational leptospirosis attributable to livestock exposure. (pp. 9). , Institute of Veterinary, Animal and Biomedical Sciences Research Colloquium Palmerston North, NZ: Massey University, Institute of Veterinary, Animal and Biomedical Sciences
[Conference Abstract]Authored by: Collins-Emerson, J., Midwinter, A., Ridler, A.
Ayanegui Alcerreca, MA., Wilson, PR., Mackintosh, C., Collins Emerson, JM., Heuer, C., Castillo Alcala, F., . . . Midwinter, AC. (2005). Deer leptospirosis vaccination: A preliminary report. Proceedings of a Deer Course for Veterinarians. (pp. 132 - 136). Palmerston North, NZ
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., Midwinter, A.
Ayanegui Alcerreca, MA., Wilson, PR., Mackintosh, C., Collins Emerson, JM., Heuer, C., & Midwinter, AC. (2005). Epidemiology and control of leptospirosis in New Zealand farmed deer: A summary of Massey University research. Proceedings of a Deer Course for Veterinarians. (pp. 128 - 131). Palmerston North, NZ
[Conference Paper in Published Proceedings]Authored by: Collins-Emerson, J., Midwinter, A.
Dorjee, S., Ridler, AL., Collins, JM., Midwinter, AC., West, DM., Heuer, C., . . . Jackson, R. (2005). Leptospirosis in sheep in New Zealand. Publication (New Zealand Veterinary Association. Vetlearn). Vol. 245 (pp. 19 - 32). Palmerston North, NZ: New Zealand Veterinary Association Conference
[Conference Paper in Published Proceedings]Authored by: Midwinter, A., Ridler, A.
Heuer, C., Dorjee, S., Ridler, A., Ayanegui Alcerreca, MA., Collins Emerson, JM., Midwinter, AC., . . . Wilson, PR. (2005, December). Human occupational leptospirosis attributable to livestock exposure. Presented at Institute of Veterinary, Animal and Biomedical Sciences Research Colloquium 2005. Massey University, Palmerston North, NZ.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., Midwinter, A.
Ayanegui Alcerreca, MA., Wilson, PR., Dean, G., Midwinter, AC., & Collins Emerson, JM. (2004, November). An outbreak of leptospirosis in New Zealand farmed deer caused by Leptospira icterohaemorrhagiae sv. pomona. Presented at New Zealand Microbiological Society Conference: Microbes Outside the Square. Palmerston North, NZ.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., Midwinter, A.
Ayanegui Alcerreca, MA., Wilson, PR., Mackintosh, CG., Collins Emerson, JM., Heuer, C., & Midwinter, AC. (2004, February). Deer and leptospirosis: A review of the world situation. Presented at 1st World Deer Veterinary Congress 2004: Deer Branch NZVA. Queenstown, NZ.
[Conference Oral Presentation]Authored by: Collins-Emerson, J., Midwinter, A.

Other

Toombs-Ruane, L., Burgess, S., French, N., Biggs, PJ., Midwinter, A., Marshall, J., . . . Benschop, J. (2017, June). Faecal carriage of ESBL - and AmpC - producing Escherichia coli from co-habiting people and pets. In 7th symposium on antimicrobial resistance in animals and the environment. Presented at Braunschweig, germany.
[Oral Presentation]Authored by: Benschop, J., Biggs, P., Burgess, S., Douwes, J., French, N., Marshall, J., Midwinter, A., Roberts, M.
Biggs, P., Jolley, KA., Maiden, MCJ., Collins-Emerson, J., Kwan, E., Midwinter, A., . . . French, N. (2012, December). The pathogenomics of Campylobacter jejuni at the "micro" and "macro" scale. In Seminars: Biological Sciences, University of Canterbury, Christchurch, New Zealand.
[Oral Presentation]Authored by: Biggs, P., Collins-Emerson, J., French, N., Midwinter, A.
Biggs, P., Midwinter, A., Binney, BM., Phiri, B., Fong, R., & French, N. (2012, May). Beyond the bacterial genome: The application of metagenomics and the Omniolog™ phenotypic microarray system to food safety, animal health and water quality issues in New Zealand. In Molecular Diagnostics Workshop, National Centre for Biosecurity and Infectious Disease, Wellington, New Zealand.
[Oral Presentation]Authored by: Biggs, P., French, N., Midwinter, A.
Heuer, C., Wilson, P., Collins-Emerson, J., Dreyfus, A., Subharat, S., Fang, F., . . . Midwinter, A. (2009). Massey researchers contribute to international leptospirosis conference. (pp. 26 - 28). New Zealand Veterinary Association
[Other]Authored by: Benschop, J., Collins-Emerson, J., Midwinter, A.

Teaching and Supervision

Summary of Doctoral Supervision

Position Current Completed
Main Supervisor 1 1
Co-supervisor 5 10

Current Doctoral Supervision

Main Supervisor of:

  • Meredith Davis - Doctor of Philosophy
    Genomics and eDNA provide a holistic understanding of microbial communities and zoonoses in Aotearoa's waters

Co-supervisor of:

  • Alice Bradbury - Doctor of Philosophy
    Real-time, long-read metagenomics for identification of pathogens from retail poultry
  • Natalia Gonzalez Gonzalez - Doctor of Philosophy
    Antimicrobial resistant bacteria and their genes in dairy calves and their environment.
  • Holly Gray - Doctor of Philosophy
    Understanding the survival mechanisms of STEC in New Zealand from an evolutionary context.
  • Aline Parolin Calarga - Doctor of Philosophy
    Genotypic characterisation and antimicrobial resistance profile of enteric pathogens of public health importance in New Zealand.
  • Valter Dos Anjos Almeida - Doctor of Philosophy
    Genetic diversity of enteric microbes and its impacts on host switching

Completed Doctoral Supervision

Main Supervisor of:

  • 2024 - Alexis Risson - Doctor of Philosophy
    Spoilage bacteria in ewe milk and the sheep dairy farm environment

Co-supervisor of:

  • 2022 - Rose Collis - Doctor of Philosophy
    Metagenomic analysis and culture-based methods to examine the prevalence and distribution of antimicrobial resistance on two New Zealand dairy farms
  • 2022 - Nilukshi Liyanagunawardena - Doctor of Philosophy
    Molecular epidemiology of Salmonella in the Broiler Industry of Sri Lanka
  • 2021 - Chamindani Meda Gedara - Doctor of Philosophy
    Health risks associated with the conservation of kākāpō (Strigops habroptilus) on offshore islands
  • 2019 - Yufeng Zhang - Doctor of Philosophy
    The signal-based microbial spoilage on New Zealand export lamb
  • 2019 - Leah Toombs-Ruane - Doctor of Philosophy
    Is the family pet a risk for multidrug resistant infections?
  • 2018 - Andrew Springer Browne - Doctor of Philosophy
    A food chain approach to control of shiga-toxin producing E. coli in New Zealand
  • 2017 - Samuel Bloomfield - Doctor of Philosophy
    Transmission and evolution of bacteria during the course of enteritis outbreaks
  • 2017 - Antoine Nohra - Doctor of Philosophy
    Molecular epidemiological studies of Campylobacter isolated from different sources in New Zealand between 2005 and 2015
  • 2017 - Krunoslav Bojanic - Doctor of Philosophy
    Campylobacter species in dogs and cats and significance to public health in New Zealand
  • 2015 - Anja Friedrich - Doctor of Philosophy
    Campylobacter jejuni microevolution and phenotype: genotype relationships